AEBC 04/20b

 

RESEARCH AGENDAS WORKSTREAM: SOIL SCIENCE CASE STUDY

 

 

I. A BRIEF COMMENTARY ON SOIL SCIENCE DEVELOPMENTS – A PAPER TO STIMULATE DISCUSSION BY JEFF MAXWELL

 

Introduction and Summary

 

1.      The soil is a highly complex and dynamic system. Understanding its physical and chemical properties is hard enough, but it also harbours a remarkable biodiversity. The relationships between these abiotic and biotic components and the soil’s many functions are still poorly understood. Nevertheless, since its beginnings in the 19th century, soil science has helped to produce the vastly improved yields of modern agriculture.

 

2.      The soil’s role in a host of other processes, such as carbon cycling and climate change, pollution and ecosystem function mean that factors other than a desire to improve agricultural productivity can influence research agendas. In the last twenty-five years in most Western cultures, the key drivers behind soil science have changed considerably as technical advances have begun to allow fundamental soil processes to be understood. Food production continues to be the driving force behind soil science research in developing countries. Soil science is an interesting case study of how a particular area of science is adapting to changing priorities and as technical developments allow new approaches to be taken.

 

The Nineteenth Century

 

3.      The early stages of soil science from the beginning to the late 19th century developed along two separate lines – the agricultural soil chemistry path and the weathered rock, soil physics and agrogeology path[1].  There was little significant interaction between them until the beginning of the 20th century.  However, there were a number of important developments over this period: Liebig’s mineral theory of plant nutrients of the 1840’s; the recognition of the importance of the soil profile (later pedon) by Darwin and Dokuchaev; the identification of soil forming processes (e.g. the role of earthworms in soil mixing, Darwin 1881); the variable nature of humus (soil organic matter) and its role in soil forming processes (e.g. Mueller, 1840-1926);

 

4.      Consequent upon and following the establishment of the long-term field experiments by Lawes and Gilbert in the 1840’s the research at Rothamsted focussed on the relationship between soil conditions and fertility and its effect on crop yield.  Out of these experiments and many others the first edition of Soil Conditions and Plant Growth by Sir E John Russell was published in 1912.  His son, Walter Russell, published the eighth edition in 1973, and the 11th multi-authored edition was published in 1988.  The several editions of this book have played no small part in shaping the evolution of soil science in Britain and in many other countries of the world[2] recognising that soil science and soil management is a multi-disciplined activity embracing pedology (the study of soil origins and the soil profile), soil chemistry, soil physics, soil biology, plant nutrition and other branches of the life sciences. 

 

5.      The principle drivers of research during the 19th century were curiosity and a need to understand how to use soils and fertilise them to maintain and increase crop yields.  The design of the long-term Rothamsted experiments reflects this; a comparison of the yield of crops grown on soils receiving farm yard manure plus inorganic nitrogen and soils receiving inorganic nitrogen, phosphorus and potassium compound fertilisers.  The funding came from trusts and farmers committed to improving their husbandry techniques and the output from their farms.  Farmers were involved in the research.

 

The Twentieth Century

 

6.      At the beginning of the 20th century an understanding of the role of microbes in the decomposition of plant residues in returning nutrients to the soil (e.g. Waksman, 1888-1973) was developed, and towards the middle of the century following Jenny’s model (1941) of soil nutrient dynamics, different types of model were developed to understand the medium and long term dynamics of soil organic matter.  The early part of the 20th century saw also the beginnings of soil survey in Britain which led ultimately to the production of the 1:250,000 scale soil survey of England and Wales in 1983 and of Scotland in 1989[3].

 

7.      During the first half of the 20th century a greater understanding of soil chemistry and plant nutrition provided the impetus both to establish the extent of variation in agricultural soils through soil survey and to gain greater understanding of how to mange their nutrient status to support a variety of crops.  This was a period during which the Agricultural Research Council was established (1934) and the Departments of Agriculture began to take initiatives during and after World War II to improve output from British agriculture.  Thus the funding for soil science during this period was predominantly from the public purse. The rapid development of soil science and the need to increase crop yields were primary drivers during this period.

 

From 1975

 

8.      These drivers continued to influence developments into the third quarter of the 20th century.  In parallel with the other sciences supporting agriculture there was a rapid growth in funding for soil science and in technological development to produce the bulk of our ‘food from our own resources’.  This was the case not only in the UK but also in the USA.  Commenting on this period, Warkentin (1992), states ‘Crop production was the engine driving this effort, and its emphasis was on inputs rather than on managing systems. …..During this period there was little emphasis on reasoning from processes, it was considered better to measure effect even if it were over short time periods.’ 

 

9.      Excellent empirical solutions to problems came out of this effort.  For example, answers to how much N fertiliser should be added for maximum crop production were sought and given.  There was, therefore, little information developed on the underlying processes or on phenomena that had time scales of more than one or two years.  This seems to have delayed an interest in and understanding of the biological processes in soils[4].  Much of the research of this period was classified as being applied and descriptive.  Nevertheless, through the application of more sophisticated soil analysis techniques and the use of soil survey data to produce land capability and suitability maps, soil technology and the results of ‘fertiliser dose-response’ experiments provided the basis for increasing crop yields significantly during this period.

 

10.  Then, following first the Rothschild Report in 1971, which embodied the customer-contractor principle but which was critical of the Agricultural Research Council and second, the report of the Advisory Committee for Applied Research and Development in 1975, which emphasised the relevance of public research to manufacturing and industry, funding for agricultural research was reduced.  Consequently Agricultural Departments and the ARC began a process of prioritisation and a reduction in the numbers of scientists involved in agricultural research.

 

11.  By the early to mid 1980’s this process had gathered pace: furthermore the increased output from agriculture and the oversupply of agricultural commodities within Europe brought into question the continued public investment in agricultural research.  This was considered also in relation to the need for public research investment to support other industries and the need to improve their competitiveness.  The lack of private and commercial investment in agricultural research also began to influence funding policy.  Moreover, in 1984 ARC became AFRC, the Agricultural and Food Research Council, with responsibility to include research to address concerns about food safety.  Funding for agricultural research continued to be redeployed. 

 

12.  The negative impact on agricultural soil science research funding in the UK over this period was considerable.  During the process of prioritisation several factors appear to have influenced the reduction in resources allocated to soil science.  The large increases in crop yields that had been achieved were the result of many improvements in technology – crop breeding, methods of disease and weed control, and not least the information that related crop yield to fertiliser inputs for different soil types and cultivation regimes.  With regard to the latter soil science was deemed to have delivered.  In addition, government policy development indicated that it wished to remove funding from ‘near market research’ such as this, which it did eventually in 1990. 

 

13.  Priorities were also determined by judgments about the potential for innovation within different areas of science supporting agriculture and the growth of agribusinesses.  Developments in cell and molecular biology, and plant genomics were judged to show real promise: with its responsibility to fund science that had the potential to underpin future commercial developments the AFRC moved greater resources into this area of biotechnology.  By the mid 80’s agricultural soil science seems to have reached a plateau in terms of development and lost some of its innovative zeal.  Its period of empirical research appears to have been judged at this time to have been too applied and too ‘near market: therefore, in the ‘cut and thrust’ of prioritisation soil science ‘lost out’.

 

1990 onwards

 

14.  A combination of several changes in research policy direction and an unfavourable view of the current innovative status of soil science at the time led to a greatly reduced capacity for agricultural soil science in the UK by the beginning of the 1990’s.  While the principle driver for soil science up to the mid 80’s had been to improve crop yields, this was no longer a priority in terms of government research funding for the rest of the century.  In terms of attracting funding agricultural soil science had lost its appeal.

 

15.  However, a core capability was sustained and soil biologists were already contributing to approaches that moved the emphasis towards process based research and mathematical modelling.  Modelling provided the impetus to gain a much clearer and quantitative understanding of nutrient cycling, particularly nitrogen and carbon, and was used to understand how pesticides moved through the soil. It also led to an interest in processes at the scale of the rhizosphere.  Developments in microbiology have led to a greater ability to identify the role of populations of microbes in nutrient cycling and how specific organisms can be used to identify the resilience of soils to pollutant damage as well as being used as toxic indicators in water. At the same time, the increased functionality of soil information held in databases and within Geographic Information Systems has led to their use in a wide range of environmental and ecological applications, including the assessment of nitrate leaching and nitrous oxide emissions from agricultural soils and the ecological potential of soils for habitats of nature conservation value. Some of these applications have had direct relevance to policy, for example in the water industry. GIS and database technology has helped raise awareness of the multi-functional role of soil in the environment through these and other applications directly related to end-users other than primary producers in the agricultural sector.

 

16.  The early 90’s was a period of refocus for soil science in the UK.  It became apparent that the issues of public concern were the impact of acid rain and fertilisers on water quality and the ecology of rivers, and the resilience of soils to the impact of waste, and heavy metals as pollutants.  There was a decisive shift towards a broader interest in the role of soils in the environment and ecosystem function.  As a corollary soil research for agriculture became concerned with the more efficient use of fertilisers and effective use of farmyard manures, and a small amount of research to support the development of organic farming.  These were the issues that became the primary drivers during much of the 90’s for the limited amount of soil research that was funded.

 

17.  At an international level an important impetus developed in the late 90’s prior to and following the Kyoto Protocol to the UN Framework Convention on Climate Change, which was signed in December 1997.  The Protocol contains legally binding commitments to limit or reduce greenhouse gas emissions within the period 2008-2012 by at least 5% below 1990 levels.  Europe’s commitment is to achieve an 8% reduction and the UK has committed itself to a 12% cut with a voluntary target of 20% below that of 1990.  However, associated changes in the net fluxes of two other greenhouse gases identified in the Protocol – nitrous oxide and methane – will have to be taken into account.  The problem of how to quantify the soil sources and sinks, to maximise carbon sequestration, and to minimise soil emissions of methane and nitrous oxide presents a major scientific challenge to the soil science community over the next few years, (Smith, 1999)[5].

 

18.  The European Commission (EC) has concluded that the management of our soil resource is central to environmental ecosystem sustainability; it requires to be managed, to be conserved and protected. The EC intends to develop a soil strategy as one of seven 'thematic strategies' foreseen under the EU's 6th Environment Action Programme. As a first step in the development of an encompassing EU policy to protect soils against erosion and pollution, it published a communication Towards a Thematic Strategy for Soil Protection in April 2002[6]. This communication proposed a soil monitoring directive and the establishment of criteria of soil quality to harmonise data collection and monitoring in EU Member States.  Research in some countries of Europe including the UK has been stimulated in anticipation of having to implement these proposals.

 

19.  Partly as a result of the EU attention, Defra has recently published a Soil Action Plan for England 2004-06[7] and a UK Soil Research Audit was published in October 2003[8]. The audit said that there had been a decline in fundamental soil science research, particularly in pedology, soil mineralogy and surface chemistry. This decline had adversely affected training opportunities for the next generation of soil scientists. However, future soil science needed to be multidisciplinary and international in scope, and should aim to become a key component of wider environmental science issues. It concluded that now was a time of great opportunity and challenge for soil research because an increased knowledge base allowed soil science to contribute to tackling some of the major environmental issues, including climate change, pollution and sustainable land management.

 

Directions for the 21st Century?

 

20.  Many now argue that biology lies at the heart of the scientific enterprise of the 21st century but also see soil science as an integral part of that enterprise.  Important practical issues require soil biology knowledge.  These include understanding the role of soil processes in global warming and strategies to ameliorate it; enhanced and safe recycling of waste from manures, urban and industrial activity; pollutant destruction at waste disposal sites as well as landscapes contaminated from natural processes; biological control of rhizosphere pests; enhanced groundwater quality; discovery of new biotechnological products, including pharmaceuticals, pesticides and enzymes from the undiscovered microbial diversity of soil; and optimising recycling of soil nutrients for sustainable agriculture and forestry, Tiedje, (2001)[9].  The basic premise behind an attempt to understand the complex soil community is that further knowledge will pay off in improved agriculture, environmental decision-making and management, and many of the practical issues listed above. In this respect the drive to discover more about the hidden microbial diversity in soil is coming from science disciplines outside of agricultural and environmental science and who look primarily at waters and soil as gene banks[10] that may yield biotechnological and medical solutions as well as extend our knowledge of life strategies and evolutionary processes.

 

Where do we go from here?

 

21.  Questions:

 

·         So where are we now?  What are the current drivers for soil science in the UK? Are they explicit?  Who is setting them?

 

·         The drivers behind soil science have diversified hugely in the recent years. Does the programme of soil science research reflect the issues that are of concern to the stakeholders and the public in so far as these can be defined?  Are farmers’ concerns being addressed?

 

·         Was the redirection of resources away from agricultural soil science in the 1980a appropriate in the limited funding environment of the time, given the plateau in its development and the promise of other areas? Has this had any negative consequences? Is there still a benefit to be gained from traditional agricultural soil science and is more needed?

 

·         Rather than seeking to maximise production alone, can soil science help address the big question of sustaining food production as well contributing to environmental gain.

 

 

 

III. NEXT STEPS

 

·         Gather further information on funding of soil science at the institutes listed above (what are the programmes funded? who funds them and by how much?).

 

·         Get comments on the revised paper from members of the soil science research community.

 

 

 

III. BACKGROUND INFORMATION

 

The Soil Science Advisory Committee, set up in 1995 by BBSRC and NERC, is made up of scientists from Universities, Research Institutes, Industry and Funding Bodies. The Committee was set up to represent the interests of the soil science community and as such is able to provide a link between soils research and the main funding bodies. The Committee is currently run jointly by BBSRC and NERC with the secretariat rotating between the two Councils every two years. http://www.nerc.ac.uk/funding/tfwsci/ssac.shtml

 

The Institute of Professional Soil Scientists (IPSS), founded in 1991, is a professional body that aims to promote and enhance the status of soil science and allied disciplines. IPSS prescribes the professional standards accepted by its members and strives continually to advance their competence in scientific and technical matters. http://www.soilscientist.org/

 

The British Society of Soil Science currently has 1028 members from many countries and publishes two internationally peer reviewed soil science journals, namely the 'European Journal of Soil Science' (formerly 'The Journal of Soil Science') and 'Soil Use & Management'. The society does not simply cater for soil scientists but also includes members with strong interests in plant science, agronomy, environmental management, hydrology, geology, geomorphology and microbial ecology. http://www.soils.org.uk/

 

Rothamsted Research (RRes)

The Agriculture and Environment Division has internationally-acknowledged expertise in nutrient cycling in soils and crop plants, soil protection and remediation and carbon dynamics:

The programme aims to understand the source, behaviour, fate and impact of pollutants in soil and in the food chain in order to protect against environmental damage, and also to devise methods for remedial treatment. Specific objectives:

·         To protect yield, food, water quality and sustainable land use by identifying the factors controlling the bioavailability and transport of pollutants and pesticides in the environment.

·         The development of low-cost land and water remediation technology.

·         To reduce pesticide losses into drainage waters, particularly from cracking clay soils.

·         To provide advice on soil and water protection for policy makers and land users.

·         Also – pesticide chemistry group of the Biological Chemistry division.

 

Institute of Grassland and Environmental Research (IGER)

Soil, Environmental and Ecological Sciences is one of three Research Departments at IGER. It is based at two IGER research sites, North Wyke (Devon) and Plas Gogerddan (near Aberystwyth, Wales).

Research activities relate to: Environmental and land management research into nutrient cycling, plant microbe interactions, agro-ecology, grazing behaviour and management of farm manures and nutrient resources. Includes Soil Science and Environmental Quality Team.

 

Silsoe Research Institute (SRI)

SRI specialises in bio-systems engineering for the environmental, agricultural and land use communities. The Soil Physics Group is one of the 7 groups in SRI. Research on the properties of soil is vital if we are to understand how to sustain our soils in good condition and restore those that have become damaged. In the Soil Physics Group we are looking at the ways in which plants and soils interact, at how soils and stresses such as rainfall interact and at how we can sense and measure the qualities that are indicative of good, well-functioning soil. To this end we use and analyse output from computer models describing the structure of soil, study how organic matter confers desirable strength to soils and carry out field experimentation on sites that range in function from vegetable production to salt marsh barriers to inundation.

 

Warwick Horticultural Research International (HRI)

Warwick HRI research includes the area of Nutrient and Pesticide Dynamics.

Horticultural production relies heavily on the input of mineral nutrients and pesticides. Our primary aim is to study the behaviour of nutrients and pesticides in soil and the uptake and utilisation of nutrients by plants in order to deliver improved management practices for the benefit of crop production and environmental protection.

 

Centre for Ecology and Hydrology (CEH)

Among NERC’s soil science activities is a directed research programme on Soil Biodiversity (now complete).

 

Scottish Crop Research Institute (SCRI)

The SCRI’s Environment theme includes the Plant-Soil Interface programme. SCRI is at the forefront of multi-disciplinary research involving soil microbiology, nutrient dynamics, mathematical modelling, molecular ecology and soil biophysics to gain a better understanding of how plants interact with the soil environment. Research Areas include: Soil Ecology; Soil Biophysics; Nutrient Dynamics; Soil Sustainability; and Resilience and Biodiversity

 

Macaulay Land Use Research Institute (MLURI)

The MLURI Soil, Plant and Microbial Interactions Research Programme includes a Soil Microbiology and Chemistry theme. Research aims are to:

·         develop and apply molecular methods for assessing the diversity (and functioning) of soil bacterial and fungal communities;

·         develop novel biochemical approaches such as community-level physiological profiles of soil microbial communities, and use them to study the impacts of land use, environmental change and pollution on soil microbial community structure;

·         understand and manipulate rhizosphere and in plantae microbial populations for remediating soil contamination;

·         determine linkages between individual plant species and soil microbial diversity and activity;

·         measure the impact of changes in rhizodeposition of C on the development of soil microbial communities; and

·         quantify the impact of defoliation and urine deposition on soil solution chemistry, root composition, microbial community dynamics and the availability of soil N and P.

With the University of Aberdeen, MLURI has also established a soil health initiative. This aims to exploit molecular biological techniques to better understand soil as a vital living system, including research on soil biodiversity, pathogenic microorganisms, the role of fungi in decomposition and nutrient cycling and the use of GM or naturally bioluminescent fungi as biosensors for pollutants.

 



[1] This paragraph is based on the first chapter of ‘History of Soil Science’ : an international perspective / Dan H.Yaalon, and S. Berkowicz (ed.). Reiskirchen : Catena Verl., 1997: Advances in Geology 29

[2] Greenland D.J. (1997) Inaugral Russel Memorial Lecture – Soil Conditions and Plant Growth, Soil Use and Management 13, 169-177

[3] Hollis, J M and Avery, B W (1997) History of Soil Survey and Development of the Soil Series Concept in the UK, Advances in Geology 29

[4] Warkentin, B P (1992) ‘Soil Science for Environmental Quality – How do we know what we know? J. Environ. Qual. 21 163-166

[5] Smith, K A (1999) After the Kyoto Protocol: Can soil scientists make a useful contribution? Soil Use and Management 15 71-75.

[6] See http://europa.eu.int/comm/environment/soil/#1.

[7] See http://www.defra.gov.uk/environment/land/soil/actionplan.htm.

[8] See http://www.defra.gov.uk/environment/land/soil/research/researchaudit.htm.

[9] Tiedje, J M., Cho, J C., Murray, A., Treves, D., Xia, B & Zhou (2001) Soil Teeming with Life: New Frontiers for Soil Science in Sustainable Management of Soil Organic Matter eds R M Rees, B C Ball, C D Campbell and C A Watson

[10] See http://www.sorcerer2expedition.org/main.htm